Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 543970 - 544082 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 544672 - 546204 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 546382 - 546458 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 546484 - 546559 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 546921 - 549799 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 549958 - 550070 | Not Available |
| sulp family inorganic anion transporter | LPB072_RS02670 | Not Available | Positive | 550976 - 552667 | 60266.4 |
| duf1840 domain-containing protein | LPB072_RS02675 | Not Available | Positive | 552810 - 553133 | 12093.6 |
| hypothetical protein | LPB072_RS02680 | Not Available | Negative | 553150 - 553524 | 12355.8 |
| trap transporter large permease | LPB072_RS02685 | Not Available | Negative | 553620 - 554903 | 45388.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
