Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | LPB072_RS02590 | Not Available | Negative | 530008 - 530604 | 21158.6 |
| dmt family transporter | LPB072_RS02595 | Not Available | Negative | 530601 - 531545 | 33357.6 |
| lyse family translocator | LPB072_RS02600 | Not Available | Negative | 531548 - 532198 | 22849.6 |
| plp-dependent aminotransferase family protein | LPB072_RS02605 | Not Available | Positive | 532484 - 533905 | 51362.3 |
| hybrid sensor histidine kinase/response regulator | LPB072_RS02610 | Not Available | Negative | 533877 - 536048 | 79122.6 |
| atp-binding cassette domain-containing protein | LPB072_RS02615 | Not Available | Negative | 536081 - 537976 | 69241.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 538684 - 540216 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 540394 - 540470 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 540496 - 540571 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 540933 - 543811 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
