Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | LPB072_RS02395 | Not Available | Positive | 487482 - 487952 | 16666.2 |
| hpr(ser) kinase/phosphatase | LPB072_RS02400 | Not Available | Positive | 488086 - 489036 | 35337.0 |
| ferric iron uptake transcriptional regulator | LPB072_RS02405 | Not Available | Negative | 489052 - 489489 | 16720.9 |
| outer membrane protein assembly factor bame | LPB072_RS02410 | Not Available | Positive | 489661 - 490257 | 21468.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | LPB072_RS02415 | Not Available | Positive | 490254 - 491081 | 28566.3 |
| mota/tolq/exbb proton channel family protein | LPB072_RS02420 | Not Available | Positive | 491113 - 491784 | 23789.0 |
| biopolymer transporter exbd | LPB072_RS02425 | Not Available | Positive | 491830 - 492246 | 14625.8 |
| leucine--trna ligase | LPB072_RS02430 | Not Available | Positive | 492359 - 495121 | 101495.0 |
| lps assembly lipoprotein lpte | LPB072_RS02435 | Not Available | Positive | 495132 - 495722 | 21069.4 |
| dna polymerase iii subunit delta | LPB072_RS02440 | Not Available | Positive | 495736 - 496788 | 38002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
