Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b/b6 domain-containing protein | LPB072_RS02345 | Not Available | Positive | 476368 - 476928 | 21393.3 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | LPB072_RS02350 | Not Available | Positive | 477025 - 477441 | 14960.9 |
| nudix hydrolase | LPB072_RS02355 | Not Available | Negative | 477448 - 477927 | 17805.1 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | LPB072_RS02360 | Not Available | Positive | 478147 - 479772 | 56178.1 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | LPB072_RS02365 | Not Available | Positive | 479789 - 481207 | 49569.6 |
| long-chain-fatty-acid--coa ligase | LPB072_RS02370 | Not Available | Positive | 481479 - 483161 | 60578.7 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | LPB072_RS02375 | Not Available | Positive | 483323 - 484126 | 28608.3 |
| magnesium/cobalt transporter cora | LPB072_RS02380 | Not Available | Negative | 484203 - 485189 | 37645.3 |
| patatin-like phospholipase family protein | LPB072_RS02385 | Not Available | Negative | 485432 - 486670 | 44393.2 |
| ribosome hibernation-promoting factor, hpf/yfia family | LPB072_RS02390 | Not Available | Positive | 487011 - 487340 | 12591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
