Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | LPB072_RS02295 | Not Available | Negative | 466888 - 468006 | 40917.4 |
| dioxygenase | LPB072_RS02300 | Not Available | Positive | 468170 - 468997 | 29178.8 |
| hypothetical protein | LPB072_RS02305 | Not Available | Positive | 469022 - 469492 | 16737.1 |
| extracellular solute-binding protein | LPB072_RS02310 | Not Available | Positive | 469665 - 470729 | 38544.4 |
| abc transporter atp-binding protein | LPB072_RS02315 | Not Available | Positive | 470745 - 471863 | 40060.4 |
| abc transporter permease | LPB072_RS02320 | Not Available | Positive | 471860 - 472726 | 31779.5 |
| abc transporter permease | LPB072_RS02325 | Not Available | Positive | 472845 - 473720 | 31767.3 |
| ethanolamine ammonia-lyase subunit eutb | LPB072_RS02330 | Not Available | Positive | 473793 - 475163 | 48390.2 |
| ethanolamine ammonia-lyase subunit eutc | LPB072_RS02335 | Not Available | Positive | 475160 - 475966 | 28786.5 |
| pepsy domain-containing protein | LPB072_RS02340 | Not Available | Positive | 476100 - 476351 | 9222.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
