Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | LPB072_RS22835 | Not Available | Negative | 4933011 - 4933733 | 25668.1 |
| lps export abc transporter periplasmic protein lptc | LPB072_RS22840 | Not Available | Negative | 4933825 - 4934478 | 24120.8 |
| kdsc family phosphatase | LPB072_RS22845 | Not Available | Negative | 4934475 - 4935041 | 19990.3 |
| kpsf/gutq family sugar-phosphate isomerase | LPB072_RS22850 | Not Available | Negative | 4935167 - 4936165 | 34231.5 |
| cation:proton antiporter | LPB072_RS22855 | Not Available | Positive | 4936225 - 4938210 | 71813.7 |
| adenine phosphoribosyltransferase | LPB072_RS22860 | Not Available | Positive | 4938264 - 4938809 | 19612.9 |
| hypothetical protein | LPB072_RS22865 | Not Available | Negative | 4938834 - 4939517 | 25422.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | LPB072_RS22870 | Not Available | Negative | 4939630 - 4941033 | 49864.7 |
| membrane protein insertase yidc | LPB072_RS22875 | Not Available | Negative | 4941196 - 4942923 | 63712.6 |
| membrane protein insertion efficiency factor yidd | LPB072_RS22880 | Not Available | Negative | 4942920 - 4943177 | 9344.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
