Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | LPB072_RS22685 | Not Available | Negative | 4897191 - 4898195 | 35755.4 |
| gfo/idh/moca family protein | LPB072_RS22690 | Not Available | Negative | 4898229 - 4899266 | 36015.3 |
| enolase c-terminal domain-like protein | LPB072_RS22695 | Not Available | Negative | 4899289 - 4900578 | 46499.7 |
| trap transporter large permease | LPB072_RS22700 | Not Available | Negative | 4900588 - 4901871 | 45385.2 |
| trap transporter small permease | LPB072_RS22705 | Not Available | Negative | 4901871 - 4902398 | 19436.3 |
| trap transporter substrate-binding protein | LPB072_RS22710 | Not Available | Negative | 4902513 - 4903493 | 35447.1 |
| fadr/gntr family transcriptional regulator | LPB072_RS22715 | Not Available | Positive | 4903670 - 4904398 | 26762.7 |
| glucarate dehydratase | LPB072_RS22720 | Not Available | Positive | 4904490 - 4905818 | 48720.3 |
| 2-hydroxy-3-oxopropionate reductase | LPB072_RS22725 | Not Available | Positive | 4905948 - 4906832 | 30207.8 |
| glycerate kinase | LPB072_RS22730 | Not Available | Positive | 4906862 - 4908151 | 43730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
