Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease domain-containing protein | LPB072_RS23615 | Not Available | Positive | 4886163 - 4886468 | 11217.4 |
| barstar family protein | LPB072_RS22640 | Not Available | Positive | 4886527 - 4886922 | 15182.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | LPB072_RS22645 | Not Available | Negative | 4887285 - 4888049 | 28763.1 |
| peptidylprolyl isomerase | LPB072_RS22650 | Not Available | Negative | 4888081 - 4889448 | 50051.6 |
| lps-assembly protein lptd | LPB072_RS22655 | Not Available | Negative | 4889461 - 4891866 | 88418.7 |
| aminoglycoside phosphotransferase family protein | LPB072_RS22660 | Not Available | Positive | 4892176 - 4893267 | 41442.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | LPB072_RS22665 | Not Available | Positive | 4893284 - 4894006 | 25388.6 |
| 3-deoxy-7-phosphoheptulonate synthase | LPB072_RS22670 | Not Available | Positive | 4894108 - 4895163 | 37211.8 |
| duf4870 family protein | LPB072_RS22675 | Not Available | Negative | 4895173 - 4895538 | 13909.1 |
| galactarate dehydratase | LPB072_RS22680 | Not Available | Negative | 4895638 - 4897194 | 54755.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
