Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | LPB072_RS22585 | Not Available | Positive | 4873204 - 4873908 | 25037.9 |
| hypothetical protein | LPB072_RS22590 | Not Available | Negative | 4873984 - 4874229 | 8146.91 |
| hypothetical protein | LPB072_RS22595 | Not Available | Positive | 4874983 - 4875933 | 34591.1 |
| aminopeptidase p n-terminal domain-containing protein | LPB072_RS22600 | Not Available | Positive | 4875977 - 4877374 | 51413.0 |
| cytochrome-c peroxidase | LPB072_RS22605 | Not Available | Negative | 4877396 - 4878622 | 44742.7 |
| duf6394 family protein | LPB072_RS22610 | Not Available | Positive | 4878959 - 4879339 | 13132.3 |
| potassium channel family protein | LPB072_RS22615 | Not Available | Positive | 4879350 - 4881110 | 64406.1 |
| mechanosensitive ion channel family protein | LPB072_RS22620 | Not Available | Negative | 4881120 - 4882058 | 34060.3 |
| 1-phosphofructokinase family hexose kinase | LPB072_RS22625 | Not Available | Positive | 4882239 - 4883231 | 34563.6 |
| nadp-dependent malic enzyme | LPB072_RS22630 | Not Available | Positive | 4883492 - 4885828 | 84265.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
