Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | LPB072_RS22535 | Not Available | Positive | 4859804 - 4860751 | 34788.9 |
| glutathione s-transferase family protein | LPB072_RS22540 | Not Available | Negative | 4860885 - 4861535 | 23803.9 |
| dna topoisomerase iii | LPB072_RS22545 | Not Available | Negative | 4861706 - 4864681 | 108915.0 |
| set domain-containing protein | LPB072_RS22550 | Not Available | Positive | 4864786 - 4865310 | 19488.1 |
| hypothetical protein | LPB072_RS22555 | Not Available | Positive | 4865553 - 4866134 | 21662.8 |
| hypothetical protein | LPB072_RS22560 | Not Available | Positive | 4866144 - 4867757 | 58359.0 |
| biotin--[acetyl-coa-carboxylase] ligase | LPB072_RS22565 | Not Available | Positive | 4867798 - 4868604 | 28355.0 |
| spor domain-containing protein | LPB072_RS22570 | Not Available | Positive | 4868610 - 4869365 | 27195.5 |
| type i glyceraldehyde-3-phosphate dehydrogenase | LPB072_RS22575 | Not Available | Negative | 4869831 - 4870829 | 35743.8 |
| transketolase | LPB072_RS22580 | Not Available | Negative | 4870980 - 4873046 | 73469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
