Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | LPB072_RS22485 | Not Available | Negative | 4850286 - 4851452 | 41343.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | LPB072_RS22490 | Not Available | Positive | 4851638 - 4852561 | 32592.3 |
| duf4336 domain-containing protein | LPB072_RS22495 | Not Available | Negative | 4852595 - 4853278 | 25576.3 |
| recombination regulator recx | LPB072_RS22500 | Not Available | Negative | 4853384 - 4853842 | 17022.6 |
| duf6500 family protein | LPB072_RS22505 | Not Available | Negative | 4853901 - 4854104 | 7560.02 |
| recombinase reca | LPB072_RS22510 | Not Available | Negative | 4854125 - 4855240 | 39691.9 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS22515 | Not Available | Positive | 4855545 - 4856033 | 18002.4 |
| response regulator transcription factor | LPB072_RS22520 | Not Available | Positive | 4856164 - 4856838 | 24527.9 |
| sensor histidine kinase | LPB072_RS22525 | Not Available | Positive | 4856903 - 4858345 | 53237.0 |
| aspartate aminotransferase family protein | LPB072_RS22530 | Not Available | Negative | 4858354 - 4859709 | 48208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
