Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhdp family protein | LPB072_RS22385 | Not Available | Negative | 4823720 - 4827841 | 147376.0 |
| bifunctional | LPB072_RS22390 | Not Available | Positive | 4827913 - 4830762 | 105662.0 |
| rhomboid family intramembrane serine protease | LPB072_RS22395 | Not Available | Positive | 4830759 - 4831412 | 23867.2 |
| glutathione s-transferase n-terminal domain-containing protein | LPB072_RS22400 | Not Available | Negative | 4831756 - 4832370 | 22411.1 |
| adenylosuccinate lyase | LPB072_RS22405 | Not Available | Positive | 4832728 - 4834158 | 52371.2 |
| mbl fold metallo-hydrolase | LPB072_RS22410 | Not Available | Positive | 4834372 - 4835139 | 27925.6 |
| duf3717 domain-containing protein | LPB072_RS22415 | Not Available | Negative | 4835174 - 4835578 | 15435.3 |
| terc family protein | LPB072_RS22420 | Not Available | Positive | 4835891 - 4836613 | 25232.9 |
| phage holin family protein | LPB072_RS22425 | Not Available | Positive | 4836644 - 4836994 | 12255.8 |
| m48 family metalloprotease | LPB072_RS22430 | Not Available | Negative | 4836977 - 4838524 | 55340.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
