Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | LPB072_RS22290 | Not Available | Positive | 4797493 - 4798599 | 38540.4 |
| duf1631 family protein | LPB072_RS22295 | Not Available | Negative | 4799399 - 4801915 | 90797.2 |
| protein translocase subunit secf | LPB072_RS22300 | Not Available | Negative | 4802125 - 4803081 | 34862.7 |
| protein translocase subunit secd | LPB072_RS22305 | Not Available | Negative | 4803270 - 4805159 | 67156.4 |
| preprotein translocase subunit yajc | LPB072_RS22310 | Not Available | Negative | 4805341 - 4805661 | 11320.2 |
| indolepyruvate ferredoxin oxidoreductase family protein | LPB072_RS22315 | Not Available | Negative | 4805837 - 4809421 | 130261.0 |
| lrp/asnc family transcriptional regulator | LPB072_RS22320 | Not Available | Positive | 4809585 - 4810082 | 18107.8 |
| sdrd b-like domain-containing protein | LPB072_RS23760 | Not Available | Positive | 4810251 - 4812533 | 83225.1 |
| hypothetical protein | LPB072_RS22330 | Not Available | Positive | 4812741 - 4813385 | 20983.8 |
| hypothetical protein | LPB072_RS22335 | Not Available | Positive | 4813461 - 4814321 | 30597.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
