Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | LPB072_RS02190 | Not Available | Positive | 444667 - 445509 | 29947.6 |
| glutathione s-transferase family protein | LPB072_RS02195 | Not Available | Positive | 445605 - 446336 | 27196.7 |
| glutathione s-transferase family protein | LPB072_RS02200 | Not Available | Positive | 446333 - 446950 | 23323.2 |
| mipa/ompv family protein | LPB072_RS02205 | Not Available | Positive | 447133 - 447834 | 25573.1 |
| excinuclease abc subunit uvra | LPB072_RS02210 | Not Available | Negative | 447983 - 451096 | 112444.0 |
| dmt family transporter | LPB072_RS02215 | Not Available | Negative | 451237 - 452163 | 31961.4 |
| acyltransferase family protein | LPB072_RS02220 | Not Available | Negative | 452395 - 453444 | 38760.4 |
| mfs transporter | LPB072_RS02225 | Not Available | Positive | 453662 - 454870 | 41959.7 |
| chloride channel protein | LPB072_RS02230 | Not Available | Negative | 454881 - 456485 | 55896.6 |
| single-stranded dna-binding protein | LPB072_RS02235 | Not Available | Positive | 456610 - 457113 | 17576.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
