Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | LPB072_RS22240 | Not Available | Positive | 4788191 - 4788943 | 27327.8 |
| nad-dependent epimerase/dehydratase family protein | LPB072_RS22245 | Not Available | Negative | 4788925 - 4789938 | 36878.4 |
| arnt family glycosyltransferase | LPB072_RS22250 | Not Available | Negative | 4789935 - 4791674 | 65633.4 |
| tvp38/tmem64 family protein | LPB072_RS22255 | Not Available | Negative | 4791646 - 4792341 | 25371.8 |
| glycosyltransferase family 2 protein | LPB072_RS22260 | Not Available | Negative | 4792325 - 4793122 | 28596.3 |
| azld domain-containing protein | LPB072_RS22265 | Not Available | Negative | 4793264 - 4793599 | 12213.3 |
| azlc family abc transporter permease | LPB072_RS22270 | Not Available | Negative | 4793592 - 4794335 | 26251.8 |
| methionyl-trna formyltransferase | LPB072_RS22275 | Not Available | Negative | 4794335 - 4795309 | 33963.1 |
| peptide deformylase | LPB072_RS22280 | Not Available | Negative | 4795351 - 4795872 | 19467.6 |
| lysm peptidoglycan-binding domain-containing protein | LPB072_RS24015 | Not Available | Positive | 4796131 - 4797486 | 49225.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
