Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b/b6 domain-containing protein | LPB072_RS22190 | Not Available | Negative | 4779197 - 4779964 | 27710.8 |
| diheme cytochrome c | LPB072_RS22195 | Not Available | Negative | 4779982 - 4780440 | 16432.4 |
| duf1924 domain-containing protein | LPB072_RS22200 | Not Available | Negative | 4780566 - 4781006 | 15608.5 |
| hypothetical protein | LPB072_RS22205 | Not Available | Negative | 4781058 - 4781612 | 20162.9 |
| pepsy domain-containing protein | LPB072_RS22210 | Not Available | Positive | 4781743 - 4782078 | 12428.1 |
| response regulator transcription factor | LPB072_RS22215 | Not Available | Positive | 4782089 - 4782751 | 24473.3 |
| sensor histidine kinase | LPB072_RS22220 | Not Available | Positive | 4782748 - 4784175 | 51084.6 |
| phosphoethanolamine transferase | LPB072_RS22225 | Not Available | Negative | 4784182 - 4785879 | 61342.1 |
| sensor histidine kinase | LPB072_RS22230 | Not Available | Negative | 4786011 - 4787348 | 48751.5 |
| response regulator transcription factor | LPB072_RS22235 | Not Available | Negative | 4787369 - 4788094 | 25696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
