Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | LPB072_RS02140 | Not Available | Negative | 433978 - 435627 | 58762.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | LPB072_RS02145 | Not Available | Positive | 435746 - 436561 | 27785.5 |
| ribosomal protein s18-alanine n-acetyltransferase | LPB072_RS02150 | Not Available | Positive | 436574 - 437182 | 22138.2 |
| uracil-dna glycosylase | LPB072_RS02155 | Not Available | Positive | 437175 - 438047 | 31034.3 |
| class ii aldolase/adducin family protein | LPB072_RS02160 | Not Available | Negative | 438035 - 438790 | 27379.9 |
| hd domain-containing protein | LPB072_RS02165 | Not Available | Negative | 438810 - 439403 | 22439.6 |
| coniferyl aldehyde dehydrogenase | LPB072_RS02170 | Not Available | Positive | 439719 - 441164 | 53031.2 |
| gmc family oxidoreductase | LPB072_RS02175 | Not Available | Positive | 441184 - 442833 | 58569.3 |
| dmt family transporter | LPB072_RS02180 | Not Available | Negative | 442836 - 443735 | 32638.2 |
| alpha/beta fold hydrolase | LPB072_RS02185 | Not Available | Positive | 443857 - 444630 | 27371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
