Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1566 domain-containing protein | LPB072_RS21740 | Not Available | Negative | 4686001 - 4687791 | 64135.6 |
| l-glyceraldehyde 3-phosphate reductase | LPB072_RS21745 | Not Available | Negative | 4688166 - 4689206 | 37957.1 |
| trap transporter substrate-binding protein | LPB072_RS21750 | Not Available | Positive | 4689469 - 4690485 | 37657.3 |
| efflux rnd transporter permease subunit | LPB072_RS21755 | Not Available | Negative | 4690533 - 4693634 | 109834.0 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS21760 | Not Available | Negative | 4693686 - 4694831 | 40496.7 |
| hypothetical protein | LPB072_RS21770 | Not Available | Positive | 4695888 - 4696121 | 8488.86 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | LPB072_RS21775 | Not Available | Negative | 4696195 - 4697703 | 53767.9 |
| lysr family transcriptional regulator | LPB072_RS21780 | Not Available | Positive | 4697828 - 4698778 | 34508.2 |
| hypothetical protein | LPB072_RS21785 | Not Available | Positive | 4698893 - 4699147 | 8912.54 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | LPB072_RS21790 | Not Available | Negative | 4699213 - 4700124 | 32915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
