Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS23600 | Not Available | Positive | 4676325 - 4676495 | 6702.96 |
| dsre family protein | LPB072_RS21695 | Not Available | Positive | 4676560 - 4677051 | 17807.6 |
| psif family protein | LPB072_RS21700 | Not Available | Positive | 4677180 - 4677557 | 12878.8 |
| l-threonylcarbamoyladenylate synthase | LPB072_RS21705 | Not Available | Negative | 4677575 - 4678588 | 34896.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | LPB072_RS21710 | Not Available | Negative | 4678602 - 4679837 | 43157.9 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | LPB072_RS21715 | Not Available | Negative | 4679842 - 4680330 | 16643.5 |
| thioredoxin | LPB072_RS21720 | Not Available | Positive | 4680483 - 4681391 | 33526.1 |
| response regulator transcription factor | LPB072_RS21725 | Not Available | Positive | 4681494 - 4682195 | 25355.5 |
| hybrid sensor histidine kinase/response regulator | LPB072_RS21730 | Not Available | Positive | 4682295 - 4683995 | 62175.5 |
| duf1566 domain-containing protein | LPB072_RS21735 | Not Available | Negative | 4684136 - 4685941 | 64515.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
