Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | LPB072_RS21645 | Not Available | Negative | 4666304 - 4666858 | 20317.4 |
| putative toxin-antitoxin system toxin component, pin family | LPB072_RS21650 | Not Available | Negative | 4666920 - 4667351 | 15694.2 |
| thump domain-containing class i sam-dependent rna methyltransferase | LPB072_RS21655 | Not Available | Negative | 4667369 - 4668706 | 49625.0 |
| rna polymerase factor sigma-54 | LPB072_RS21660 | Not Available | Negative | 4668858 - 4670498 | 60078.9 |
| lps export abc transporter atp-binding protein | LPB072_RS21665 | Not Available | Negative | 4670556 - 4671305 | 27620.6 |
| lipopolysaccharide transport periplasmic protein lpta | LPB072_RS21670 | Not Available | Negative | 4671344 - 4671982 | 22973.2 |
| thiol:disulfide interchange protein dsba/dsbl | LPB072_RS21675 | Not Available | Negative | 4672125 - 4672760 | 23205.9 |
| spor domain-containing protein | LPB072_RS21680 | Not Available | Negative | 4672876 - 4673571 | 23629.1 |
| arginine--trna ligase | LPB072_RS21685 | Not Available | Negative | 4673586 - 4675271 | 61756.2 |
| lysr family transcriptional regulator | LPB072_RS21690 | Not Available | Negative | 4675284 - 4676213 | 34172.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
