Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | LPB072_RS21500 | Not Available | Negative | 4641620 - 4642381 | 27233.7 |
| indole-3-glycerol phosphate synthase trpc | LPB072_RS21505 | Not Available | Negative | 4642384 - 4643184 | 29114.4 |
| hypothetical protein | LPB072_RS23755 | Not Available | Negative | 4643177 - 4643353 | 6169.56 |
| anthranilate phosphoribosyltransferase | LPB072_RS21510 | Not Available | Negative | 4643362 - 4644423 | 37286.2 |
| lyse family translocator | LPB072_RS21515 | Not Available | Negative | 4644441 - 4645094 | 22966.6 |
| low-specificity l-threonine aldolase | LPB072_RS21520 | Not Available | Negative | 4645109 - 4646188 | 37647.1 |
| anthranilate synthase component ii | LPB072_RS21525 | Not Available | Negative | 4646185 - 4646778 | 21677.1 |
| anthranilate synthase component i | LPB072_RS21530 | Not Available | Negative | 4646784 - 4648283 | 54728.8 |
| chalcone isomerase family protein | LPB072_RS21535 | Not Available | Positive | 4648723 - 4649313 | 21264.2 |
| chalcone isomerase family protein | LPB072_RS21540 | Not Available | Positive | 4649475 - 4650134 | 23673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
