Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | LPB072_RS21295 | Not Available | Negative | 4599142 - 4600275 | 41882.1 |
| rna polymerase sigma factor | LPB072_RS21300 | Not Available | Negative | 4600355 - 4601644 | 46562.1 |
| voc family protein | LPB072_RS21305 | Not Available | Negative | 4601669 - 4602079 | 15162.2 |
| voc family protein | LPB072_RS21310 | Not Available | Negative | 4602358 - 4602771 | 14745.7 |
| voc family protein | LPB072_RS21315 | Not Available | Negative | 4602814 - 4603314 | 18309.1 |
| duf1428 domain-containing protein | LPB072_RS21320 | Not Available | Negative | 4603311 - 4603661 | 12720.5 |
| ycii family protein | LPB072_RS21325 | Not Available | Negative | 4603796 - 4604161 | 13104.6 |
| hypothetical protein | LPB072_RS21330 | Not Available | Positive | 4604301 - 4604906 | 22835.8 |
| enoyl-coa hydratase | LPB072_RS21335 | Not Available | Negative | 4605011 - 4605775 | 27195.8 |
| patatin-like phospholipase family protein | LPB072_RS21340 | Not Available | Positive | 4606038 - 4608368 | 84074.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
