Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | LPB072_RS02090 | Not Available | Positive | 426493 - 427776 | 45158.6 |
| thioredoxin family protein | LPB072_RS02095 | Not Available | Positive | 427877 - 428257 | 13547.3 |
| duf4189 domain-containing protein | LPB072_RS02100 | Not Available | Positive | 428381 - 428773 | 12831.9 |
| lysr family transcriptional regulator | LPB072_RS02105 | Not Available | Positive | 428970 - 429929 | 34561.4 |
| s1 family peptidase | LPB072_RS02110 | Not Available | Positive | 430045 - 430833 | 26350.6 |
| s1 family peptidase | LPB072_RS02115 | Not Available | Positive | 430856 - 431647 | 27115.1 |
| lyse/argo family amino acid transporter | LPB072_RS02120 | Not Available | Negative | 431689 - 432327 | 22429.1 |
| hth-type transcriptional regulator argp | LPB072_RS02125 | Not Available | Positive | 432437 - 433351 | 32373.6 |
| hypothetical protein | LPB072_RS02130 | Not Available | Negative | 433448 - 433636 | 6770.25 |
| hypothetical protein | LPB072_RS02135 | Not Available | Positive | 433713 - 433958 | 9104.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
