Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | LPB072_RS21245 | Not Available | Positive | 4586803 - 4588335 | 54346.5 |
| f0f1 atp synthase subunit gamma | LPB072_RS21250 | Not Available | Positive | 4588338 - 4589198 | 30745.0 |
| rnb domain-containing ribonuclease | LPB072_RS21255 | Not Available | Negative | 4589234 - 4590706 | 54257.8 |
| yebc/pmpr family dna-binding transcriptional regulator | LPB072_RS21260 | Not Available | Positive | 4590882 - 4591595 | 25702.3 |
| class i sam-dependent methyltransferase | LPB072_RS21265 | Not Available | Positive | 4591779 - 4592450 | 24609.5 |
| 3'-5' exonuclease | LPB072_RS21270 | Not Available | Negative | 4592466 - 4593212 | 27497.4 |
| duf294 nucleotidyltransferase-like domain-containing protein | LPB072_RS21275 | Not Available | Negative | 4593224 - 4595113 | 69587.3 |
| bcct family transporter | LPB072_RS21280 | Not Available | Negative | 4595113 - 4596741 | 57654.3 |
| dicarboxylate/amino acid:cation symporter | LPB072_RS21285 | Not Available | Negative | 4596969 - 4598318 | 46878.0 |
| cytochrome b | LPB072_RS21290 | Not Available | Negative | 4598485 - 4599054 | 20133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
