Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2784 domain-containing protein | LPB072_RS21145 | Not Available | Positive | 4563643 - 4564065 | 16089.9 |
| pas-domain containing protein | LPB072_RS21150 | Not Available | Positive | 4564432 - 4567431 | 108582.0 |
| signal peptide prediction | LPB072_RS21155 | Not Available | Negative | 4567586 - 4567999 | 15624.9 |
| thioesterase family protein | LPB072_RS21160 | Not Available | Negative | 4568017 - 4568499 | 17369.3 |
| acyl-coa dehydrogenase family protein | LPB072_RS21165 | Not Available | Negative | 4568496 - 4569674 | 41799.5 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | LPB072_RS23290 | Not Available | Negative | 4569671 - 4572109 | 83459.9 |
| acyl-coa dehydrogenase family protein | LPB072_RS21175 | Not Available | Negative | 4572115 - 4573287 | 43066.8 |
| acyl-coa carboxylase subunit beta | LPB072_RS21180 | Not Available | Negative | 4573315 - 4574928 | 57346.5 |
| tetr/acrr family transcriptional regulator | LPB072_RS21185 | Not Available | Negative | 4574925 - 4575617 | 25462.7 |
| pas domain s-box protein | LPB072_RS21190 | Not Available | Positive | 4575832 - 4578306 | 90697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
