Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | LPB072_RS20995 | Not Available | Negative | 4528636 - 4529511 | 31127.5 |
| mbl fold metallo-hydrolase | LPB072_RS21000 | Not Available | Positive | 4529582 - 4531273 | 60839.4 |
| low affinity iron permease family protein | LPB072_RS21005 | Not Available | Positive | 4531285 - 4531698 | 15174.2 |
| j domain-containing protein | LPB072_RS21010 | Not Available | Positive | 4532075 - 4533133 | 38295.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 4533365 - 4533726 | Not Available |
| mate family efflux transporter | LPB072_RS21020 | Not Available | Negative | 4533758 - 4535149 | 48802.8 |
| duf2239 family protein | LPB072_RS21025 | Not Available | Negative | 4535227 - 4535829 | 21435.3 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS21030 | Not Available | Positive | 4535967 - 4537805 | 65473.9 |
| glycine zipper 2tm domain-containing protein | LPB072_RS21035 | Not Available | Positive | 4537906 - 4538541 | 22672.8 |
| d-ribose pyranase | LPB072_RS21040 | Not Available | Negative | 4538816 - 4539211 | 13820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
