Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq/divib | LPB072_RS20895 | Not Available | Negative | 4505057 - 4505851 | 29452.5 |
| d-alanine--d-alanine ligase | LPB072_RS20900 | Not Available | Negative | 4505866 - 4506849 | 34759.0 |
| udp-n-acetylmuramate--l-alanine ligase | LPB072_RS20905 | Not Available | Negative | 4506846 - 4508273 | 49937.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | LPB072_RS20910 | Not Available | Negative | 4508270 - 4509349 | 38035.6 |
| putative lipid ii flippase ftsw | LPB072_RS20915 | Not Available | Negative | 4509346 - 4510629 | 46530.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | LPB072_RS20920 | Not Available | Negative | 4510629 - 4512482 | 64846.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | LPB072_RS20925 | Not Available | Negative | 4512479 - 4513657 | 43231.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | LPB072_RS20930 | Not Available | Negative | 4513647 - 4515068 | 49882.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | LPB072_RS20935 | Not Available | Negative | 4515065 - 4516591 | 53388.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | LPB072_RS20940 | Not Available | Negative | 4516603 - 4518351 | 63650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
