Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | LPB072_RS20660 | Not Available | Negative | 4452817 - 4453317 | 18665.6 |
| mbl fold metallo-hydrolase | LPB072_RS20665 | Not Available | Positive | 4453568 - 4454545 | 35720.6 |
| lysr family transcriptional regulator | LPB072_RS20670 | Not Available | Negative | 4454571 - 4455479 | 32763.5 |
| zinc-dependent alcohol dehydrogenase family protein | LPB072_RS20675 | Not Available | Positive | 4455592 - 4456590 | 34154.3 |
| duf1330 domain-containing protein | LPB072_RS20680 | Not Available | Positive | 4456651 - 4456953 | 10967.8 |
| llm class oxidoreductase | LPB072_RS20685 | Not Available | Positive | 4457019 - 4457987 | 35151.1 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS20690 | Not Available | Positive | 4458000 - 4458824 | 28865.1 |
| hypothetical protein | LPB072_RS20695 | Not Available | Positive | 4459432 - 4459929 | 18112.5 |
| hypothetical protein | LPB072_RS23595 | Not Available | Positive | 4460002 - 4460565 | 20743.9 |
| is110 family transposase | LPB072_RS20700 | Not Available | Negative | 4460877 - 4461959 | 39851.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
