Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS23590 | Not Available | Positive | 4431427 - 4431567 | 5035.19 |
| grea/greb family elongation factor | LPB072_RS20565 | Not Available | Positive | 4431691 - 4432110 | 15175.2 |
| mfs transporter | LPB072_RS20570 | Not Available | Negative | 4432139 - 4434088 | 70376.2 |
| hypothetical protein | LPB072_RS20575 | Not Available | Negative | 4434126 - 4434947 | 28614.5 |
| helix-turn-helix domain-containing protein | LPB072_RS20580 | Not Available | Positive | 4435120 - 4435851 | 27762.8 |
| proq/fino family protein | LPB072_RS20585 | Not Available | Positive | 4436088 - 4436963 | 30955.5 |
| amp-binding protein | LPB072_RS20590 | Not Available | Negative | 4437078 - 4438790 | 61749.2 |
| esterase/lipase family protein | LPB072_RS20595 | Not Available | Positive | 4438936 - 4439943 | 36739.4 |
| phenylalanine 4-monooxygenase | LPB072_RS20600 | Not Available | Negative | 4439865 - 4440719 | 32036.9 |
| 4-hydroxyphenylpyruvate dioxygenase | LPB072_RS20605 | Not Available | Negative | 4440834 - 4441970 | 41744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
