Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS20515 | Not Available | Positive | 4424217 - 4424435 | 8104.85 |
| sigma-70 family rna polymerase sigma factor | LPB072_RS20520 | Not Available | Negative | 4424568 - 4425167 | 21960.2 |
| voc family protein | LPB072_RS20525 | Not Available | Negative | 4425160 - 4425666 | 18075.1 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS20530 | Not Available | Negative | 4425894 - 4427192 | 46584.0 |
| lactoylglutathione lyase family protein | LPB072_RS20535 | Not Available | Negative | 4427345 - 4427866 | 19413.1 |
| lysr family transcriptional regulator | LPB072_RS20540 | Not Available | Positive | 4427961 - 4428854 | 32876.8 |
| barstar family protein | LPB072_RS20545 | Not Available | Positive | 4428928 - 4429257 | 11763.2 |
| tetr/acrr family transcriptional regulator | LPB072_RS20550 | Not Available | Negative | 4429339 - 4429974 | 23009.1 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS20555 | Not Available | Positive | 4430041 - 4430982 | 32869.2 |
| Trna-arg | Not Available | Not Available | Positive | 4431228 - 4431304 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
