Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS23990 | Not Available | Positive | 4415212 - 4415352 | 4822.66 |
| mfs transporter | LPB072_RS20470 | Not Available | Positive | 4415358 - 4416557 | 42121.1 |
| serine endopeptidase | LPB072_RS20475 | Not Available | Negative | 4416600 - 4417730 | 42272.5 |
| duf2145 domain-containing protein | LPB072_RS20480 | Not Available | Negative | 4417779 - 4418585 | 29684.3 |
| hypothetical protein | LPB072_RS20485 | Not Available | Negative | 4418724 - 4419200 | 15408.9 |
| yiaa/yiab family inner membrane protein | LPB072_RS20490 | Not Available | Negative | 4419256 - 4419756 | 18196.0 |
| lysr family transcriptional regulator | LPB072_RS20495 | Not Available | Negative | 4419959 - 4420867 | 33349.9 |
| vanadium-dependent haloperoxidase | LPB072_RS20500 | Not Available | Positive | 4420982 - 4422301 | 47061.2 |
| class i sam-dependent methyltransferase | LPB072_RS20505 | Not Available | Positive | 4422307 - 4423149 | 29636.5 |
| hypothetical protein | LPB072_RS20510 | Not Available | Positive | 4423208 - 4424089 | 31040.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
