Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | LPB072_RS20425 | Not Available | Negative | 4407080 - 4407496 | 15698.0 |
| mbl fold metallo-hydrolase | LPB072_RS20430 | Not Available | Positive | 4407617 - 4408696 | 40472.4 |
| non-heme iron oxygenase ferredoxin subunit | LPB072_RS20435 | Not Available | Negative | 4408700 - 4409011 | 11026.9 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | LPB072_RS20440 | Not Available | Negative | 4409059 - 4409541 | 18338.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | LPB072_RS20445 | Not Available | Negative | 4409538 - 4410842 | 49390.4 |
| lysr family transcriptional regulator | LPB072_RS20450 | Not Available | Positive | 4410947 - 4411864 | 33084.2 |
| hypothetical protein | LPB072_RS23580 | Not Available | Positive | 4412025 - 4412180 | 5432.48 |
| pqq-dependent sugar dehydrogenase | LPB072_RS20455 | Not Available | Positive | 4412228 - 4413523 | 47308.5 |
| trna guanosine(34) transglycosylase tgt | LPB072_RS20460 | Not Available | Positive | 4413535 - 4414701 | 43329.1 |
| hypothetical protein | LPB072_RS20465 | Not Available | Positive | 4414721 - 4415215 | 19376.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
