Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | LPB072_RS20375 | Not Available | Negative | 4398634 - 4399032 | 14606.3 |
| m23 family metallopeptidase | LPB072_RS20380 | Not Available | Negative | 4399084 - 4399935 | 30202.5 |
| hypothetical protein | LPB072_RS20385 | Not Available | Negative | 4399951 - 4400391 | 16403.8 |
| acetyl-coa c-acyltransferase | LPB072_RS20390 | Not Available | Negative | 4400447 - 4401640 | 40939.7 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | LPB072_RS20395 | Not Available | Negative | 4401688 - 4403490 | 70365.6 |
| carbonate dehydratase | LPB072_RS20400 | Not Available | Negative | 4403514 - 4404182 | 24499.3 |
| isovaleryl-coa dehydrogenase | LPB072_RS20405 | Not Available | Negative | 4404243 - 4405424 | 42601.3 |
| paai family thioesterase | LPB072_RS20410 | Not Available | Negative | 4405455 - 4405913 | 16313.8 |
| impact family protein | LPB072_RS20415 | Not Available | Positive | 4406045 - 4406647 | 21455.6 |
| duf1304 domain-containing protein | LPB072_RS20420 | Not Available | Negative | 4406659 - 4407024 | 12916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
