Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | LPB072_RS20225 | Not Available | Positive | 4368053 - 4369477 | 53276.7 |
| sensor histidine kinase | LPB072_RS20230 | Not Available | Positive | 4369474 - 4370796 | 48508.0 |
| hybrid sensor histidine kinase/response regulator | LPB072_RS20235 | Not Available | Positive | 4370797 - 4372014 | 44274.9 |
| response regulator | LPB072_RS20240 | Not Available | Positive | 4372011 - 4372973 | 35332.4 |
| 2-hydroxychromene-2-carboxylate isomerase | LPB072_RS20245 | Not Available | Negative | 4373003 - 4373701 | 26143.3 |
| duf1289 domain-containing protein | LPB072_RS20250 | Not Available | Negative | 4373698 - 4373931 | 8611.21 |
| ybak/ebsc family protein | LPB072_RS20255 | Not Available | Negative | 4373939 - 4374466 | 18178.8 |
| lyse family transporter | LPB072_RS20260 | Not Available | Negative | 4374507 - 4375160 | 23191.0 |
| bon domain-containing protein | LPB072_RS20265 | Not Available | Positive | 4375409 - 4375696 | 9824.63 |
| hydroxymethylglutaryl-coa lyase | LPB072_RS20270 | Not Available | Negative | 4375706 - 4376617 | 32035.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
