Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | LPB072_RS20175 | Not Available | Negative | 4350583 - 4351317 | 26486.6 |
| aldehyde dehydrogenase family protein | LPB072_RS20180 | Not Available | Negative | 4351446 - 4352882 | 49603.7 |
| sulfite exporter taue/safe family protein | LPB072_RS20185 | Not Available | Positive | 4353168 - 4353932 | 26767.7 |
| hypothetical protein | LPB072_RS20190 | Not Available | Negative | 4353972 - 4354304 | 11947.5 |
| ankyrin repeat domain-containing protein | LPB072_RS20195 | Not Available | Negative | 4354367 - 4356376 | 71827.2 |
| excinuclease abc subunit uvra | LPB072_RS20200 | Not Available | Negative | 4356391 - 4362405 | 217653.0 |
| abc transporter substrate-binding protein | LPB072_RS20205 | Not Available | Positive | 4362551 - 4363660 | 38979.0 |
| duf1501 domain-containing protein | LPB072_RS20210 | Not Available | Negative | 4363689 - 4365113 | 49344.6 |
| duf1800 domain-containing protein | LPB072_RS20215 | Not Available | Negative | 4365142 - 4367100 | 69636.2 |
| universal stress protein | LPB072_RS20220 | Not Available | Negative | 4367218 - 4367655 | 14756.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
