Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | LPB072_RS20025 | Not Available | Positive | 4323426 - 4324412 | 35864.6 |
| rrna maturation rnase ybey | LPB072_RS20030 | Not Available | Positive | 4324416 - 4324880 | 17099.3 |
| hypothetical protein | LPB072_RS20035 | Not Available | Negative | 4324899 - 4325897 | 36574.8 |
| d-aminoacyl-trna deacylase | LPB072_RS20040 | Not Available | Negative | 4325948 - 4326388 | 15490.0 |
| cation diffusion facilitator family transporter | LPB072_RS20045 | Not Available | Negative | 4326385 - 4327317 | 33805.1 |
| tyrosine--trna ligase | LPB072_RS20050 | Not Available | Negative | 4327364 - 4328566 | 43796.6 |
| m23 family metallopeptidase | LPB072_RS20055 | Not Available | Positive | 4328848 - 4330176 | 48295.0 |
| iron-sulfur cluster insertion protein erpa | LPB072_RS20060 | Not Available | Negative | 4330263 - 4330628 | 12847.9 |
| bactofilin family protein | LPB072_RS20065 | Not Available | Negative | 4330740 - 4331141 | 14222.3 |
| duf6776 family protein | LPB072_RS20070 | Not Available | Negative | 4331178 - 4331837 | 24043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
