Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | LPB072_RS19975 | Not Available | Positive | 4310745 - 4311692 | 35500.1 |
| hypothetical protein | LPB072_RS19980 | Not Available | Positive | 4311740 - 4312408 | 24207.7 |
| pas domain-containing protein | LPB072_RS19985 | Not Available | Negative | 4312480 - 4314846 | 87095.8 |
| histidine phosphatase family protein | LPB072_RS19990 | Not Available | Positive | 4314971 - 4315621 | 23891.1 |
| dsd1 family plp-dependent enzyme | LPB072_RS19995 | Not Available | Positive | 4315623 - 4316795 | 41452.6 |
| lysoplasmalogenase family protein | LPB072_RS20000 | Not Available | Positive | 4316824 - 4318602 | 65277.5 |
| spor domain-containing protein | LPB072_RS20005 | Not Available | Negative | 4318686 - 4320014 | 45496.7 |
| holliday junction branch migration dna helicase ruvb | LPB072_RS20010 | Not Available | Negative | 4320025 - 4321083 | 38866.9 |
| carbonic anhydrase | LPB072_RS20015 | Not Available | Positive | 4321257 - 4322420 | 41528.2 |
| holliday junction branch migration protein ruva | LPB072_RS20020 | Not Available | Negative | 4322807 - 4323385 | 20058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
