Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LPB072_RS19925 | Not Available | Positive | 4301473 - 4302846 | 49812.5 |
| abc transporter atp-binding protein | LPB072_RS19930 | Not Available | Negative | 4302905 - 4303999 | 39776.4 |
| carbohydrate abc transporter permease | LPB072_RS19935 | Not Available | Negative | 4304005 - 4304865 | 31135.6 |
| carbohydrate abc transporter permease | LPB072_RS19940 | Not Available | Negative | 4304983 - 4305861 | 32185.1 |
| abc transporter substrate-binding protein | LPB072_RS19945 | Not Available | Negative | 4305934 - 4307181 | 43734.3 |
| thioredoxin trxc | LPB072_RS19950 | Not Available | Negative | 4307382 - 4307822 | 16001.4 |
| duf2905 domain-containing protein | LPB072_RS19955 | Not Available | Negative | 4307906 - 4308100 | 7412.65 |
| class i sam-dependent methyltransferase | LPB072_RS19960 | Not Available | Negative | 4308246 - 4309403 | 41622.6 |
| sdr family oxidoreductase | LPB072_RS19965 | Not Available | Positive | 4309402 - 4310217 | 28662.0 |
| dihydroneopterin aldolase | LPB072_RS19970 | Not Available | Positive | 4310214 - 4310597 | 14292.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
