Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase small subunit | LPB072_RS19875 | Not Available | Negative | 4291036 - 4292124 | 39751.9 |
| barstar family protein | LPB072_RS23275 | Not Available | Negative | 4292480 - 4292689 | 8190.67 |
| 5-formyltetrahydrofolate cyclo-ligase | LPB072_RS19885 | Not Available | Negative | 4293374 - 4294012 | 24013.6 |
| lytic transglycosylase domain-containing protein | LPB072_RS19890 | Not Available | Positive | 4294052 - 4296019 | 72667.7 |
| complex i ndufa9 subunit family protein | LPB072_RS19895 | Not Available | Positive | 4296025 - 4296927 | 32027.3 |
| metal-sensitive transcriptional regulator | LPB072_RS19900 | Not Available | Positive | 4297087 - 4297425 | 12426.9 |
| glutathione s-transferase family protein | LPB072_RS19905 | Not Available | Positive | 4297599 - 4298306 | 26115.6 |
| multifunctional cca addition/repair protein | LPB072_RS19910 | Not Available | Positive | 4298341 - 4299630 | 47550.1 |
| mechanosensitive ion channel family protein | LPB072_RS19915 | Not Available | Positive | 4299795 - 4300700 | 33426.8 |
| response regulator transcription factor | LPB072_RS19920 | Not Available | Positive | 4300752 - 4301462 | 25770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
