Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [nife]-hydrogenase assembly chaperone hybe | LPB072_RS19825 | Not Available | Negative | 4283807 - 4284322 | 18722.8 |
| rubredoxin | LPB072_RS19830 | Not Available | Negative | 4284469 - 4284696 | 8605.96 |
| hydrogenase expression/formation protein | LPB072_RS19835 | Not Available | Negative | 4284693 - 4285562 | 31728.3 |
| hydrogenase | LPB072_RS19840 | Not Available | Negative | 4285601 - 4286107 | 17907.3 |
| hypc/hybg/hupf family hydrogenase formation chaperone | LPB072_RS19845 | Not Available | Negative | 4286137 - 4286442 | 10536.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | LPB072_RS19850 | Not Available | Negative | 4286526 - 4287191 | 24218.9 |
| higa family addiction module antitoxin | LPB072_RS23270 | Not Available | Negative | 4287214 - 4287555 | 12384.1 |
| ni/fe-hydrogenase, b-type cytochrome subunit | LPB072_RS19860 | Not Available | Negative | 4287735 - 4288475 | 27821.0 |
| hupe/urej family protein | LPB072_RS19865 | Not Available | Negative | 4288520 - 4289122 | 19937.9 |
| nickel-dependent hydrogenase large subunit | LPB072_RS19870 | Not Available | Negative | 4289156 - 4291015 | 68675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
