Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | LPB072_RS01940 | Not Available | Positive | 402974 - 403249 | 10276.8 |
| 50s ribosomal protein l22 | LPB072_RS01945 | Not Available | Positive | 403259 - 403594 | 12065.7 |
| 30s ribosomal protein s3 | LPB072_RS01950 | Not Available | Positive | 403611 - 404495 | 32255.9 |
| 50s ribosomal protein l16 | LPB072_RS01955 | Not Available | Positive | 404498 - 404914 | 15339.8 |
| 50s ribosomal protein l29 | LPB072_RS01960 | Not Available | Positive | 404931 - 405137 | 7465.04 |
| 30s ribosomal protein s17 | LPB072_RS01965 | Not Available | Positive | 405149 - 405418 | 10123.4 |
| peroxiredoxin | LPB072_RS01970 | Not Available | Positive | 405547 - 406053 | 17502.1 |
| gnat family n-acetyltransferase | LPB072_RS01975 | Not Available | Negative | 406143 - 406658 | 18631.4 |
| cytochrome b/b6 domain-containing protein | LPB072_RS01980 | Not Available | Negative | 406704 - 407378 | 24292.9 |
| c-type cytochrome | LPB072_RS01985 | Not Available | Positive | 407535 - 407987 | 15579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
