Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS00160 | Not Available | Negative | 31578 - 32156 | 21254.8 |
| duf692 domain-containing protein | LPB072_RS00165 | Not Available | Negative | 32153 - 33106 | 35750.1 |
| hypothetical protein | LPB072_RS23620 | Not Available | Negative | 33123 - 33341 | 8203.31 |
| atp-binding protein | LPB072_RS00175 | Not Available | Positive | 33565 - 33849 | 10235.5 |
| nad(p)h-dependent oxidoreductase | LPB072_RS00180 | Not Available | Positive | 33984 - 34646 | 24880.7 |
| long-chain-fatty-acid--coa ligase | LPB072_RS00185 | Not Available | Negative | 34751 - 36373 | 58409.5 |
| 2-oxo-tetronate isomerase | LPB072_RS00190 | Not Available | Negative | 36505 - 37302 | 29320.9 |
| tim44 domain-containing protein | LPB072_RS00195 | Not Available | Negative | 37474 - 38382 | 31310.4 |
| polc-type dna polymerase iii | LPB072_RS00200 | Not Available | Positive | 38529 - 39185 | 23559.5 |
| c40 family peptidase | LPB072_RS00205 | Not Available | Positive | 39221 - 39694 | 16719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
