Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | LPB072_RS19720 | Not Available | Positive | 4262090 - 4262590 | 16930.1 |
| mbl fold metallo-hydrolase | LPB072_RS19725 | Not Available | Negative | 4262680 - 4263660 | 35958.7 |
| tetr/acrr family transcriptional regulator | LPB072_RS19730 | Not Available | Negative | 4263784 - 4264380 | 22377.8 |
| tfox/sxy family protein | LPB072_RS19735 | Not Available | Positive | 4264584 - 4264946 | 13193.2 |
| lysr substrate-binding domain-containing protein | LPB072_RS19740 | Not Available | Positive | 4265030 - 4266055 | 37881.3 |
| dmt family transporter | LPB072_RS19745 | Not Available | Positive | 4266136 - 4267053 | 32572.6 |
| is30 family transposase | LPB072_RS19755 | Not Available | Positive | 4267548 - 4268708 | 44307.4 |
| hypothetical protein | LPB072_RS23980 | Not Available | Negative | 4269120 - 4269506 | 14352.1 |
| atp-binding protein | LPB072_RS19765 | Not Available | Negative | 4269951 - 4271333 | 49976.5 |
| nickel-dependent hydrogenase large subunit | LPB072_RS19770 | Not Available | Negative | 4271464 - 4272924 | 52659.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
