Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS19485 | Not Available | Positive | 4211390 - 4213372 | 71048.5 |
| ribulose-bisphosphate carboxylase large subunit family protein | LPB072_RS19490 | Not Available | Positive | 4213421 - 4214731 | 47049.5 |
| four-carbon acid sugar kinase family protein | LPB072_RS19495 | Not Available | Positive | 4214735 - 4216090 | 47816.0 |
| pfkb family carbohydrate kinase | LPB072_RS24220 | Not Available | Positive | 4216385 - 4216777 | 13541.0 |
| lysr family transcriptional regulator | LPB072_RS19500 | Not Available | Negative | 4216697 - 4217656 | 34705.2 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | LPB072_RS19505 | Not Available | Positive | 4217783 - 4218586 | 29020.8 |
| 4-hydroxy-2-oxoheptanedioate aldolase | LPB072_RS19510 | Not Available | Positive | 4218592 - 4219398 | 28062.6 |
| fad-binding oxidoreductase | LPB072_RS19515 | Not Available | Positive | 4219408 - 4220820 | 50010.8 |
| aldehyde dehydrogenase family protein | LPB072_RS19520 | Not Available | Positive | 4220817 - 4222289 | 52302.6 |
| carboxylesterase/lipase family protein | LPB072_RS19525 | Not Available | Positive | 4222349 - 4223923 | 54981.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
