Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LPB072_RS19385 | Not Available | Negative | 4193249 - 4193614 | 13618.6 |
| response regulator | LPB072_RS19390 | Not Available | Negative | 4193614 - 4193994 | 13999.0 |
| rubredoxin | LPB072_RS19395 | Not Available | Negative | 4194097 - 4194270 | 6353.53 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | LPB072_RS19400 | Not Available | Positive | 4194395 - 4195324 | 33101.4 |
| glutamate-1-semialdehyde 2,1-aminomutase | LPB072_RS19405 | Not Available | Positive | 4195466 - 4196761 | 45693.2 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | LPB072_RS19410 | Not Available | Negative | 4196851 - 4198437 | 56347.8 |
| fis family transcriptional regulator | LPB072_RS19415 | Not Available | Negative | 4198491 - 4198730 | 9050.87 |
| trna dihydrouridine synthase dusb | LPB072_RS19420 | Not Available | Negative | 4198759 - 4199796 | 37321.8 |
| yqaa family protein | LPB072_RS19425 | Not Available | Positive | 4199923 - 4200405 | 17340.9 |
| mfs transporter | LPB072_RS19430 | Not Available | Positive | 4200474 - 4201649 | 41281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
