Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase family protein | LPB072_RS01890 | Not Available | Positive | 394007 - 395170 | 41558.2 |
| 30s ribosomal protein s12 | LPB072_RS01895 | Not Available | Positive | 395351 - 395728 | 13974.1 |
| 30s ribosomal protein s7 | LPB072_RS01900 | Not Available | Positive | 395902 - 396372 | 17808.0 |
| elongation factor g | LPB072_RS01905 | Not Available | Positive | 396470 - 398572 | 77614.3 |
| elongation factor tu | LPB072_RS01910 | Not Available | Positive | 398782 - 399972 | 42974.8 |
| 30s ribosomal protein s10 | LPB072_RS01915 | Not Available | Positive | 399984 - 400298 | 11823.6 |
| 50s ribosomal protein l3 | LPB072_RS01920 | Not Available | Positive | 400517 - 401197 | 23706.6 |
| 50s ribosomal protein l4 | LPB072_RS01925 | Not Available | Positive | 401197 - 401817 | 23020.9 |
| 50s ribosomal protein l23 | LPB072_RS01930 | Not Available | Positive | 401814 - 402128 | 11493.1 |
| 50s ribosomal protein l2 | LPB072_RS01935 | Not Available | Positive | 402131 - 402961 | 30414.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
