Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS19235 | Not Available | Negative | 4155318 - 4155482 | 5793.84 |
| rna polymerase sigma factor | LPB072_RS19240 | Not Available | Negative | 4155538 - 4156179 | 23696.2 |
| hypothetical protein | LPB072_RS19245 | Not Available | Negative | 4156288 - 4157124 | 30079.3 |
| hypothetical protein | LPB072_RS19250 | Not Available | Positive | 4157465 - 4158226 | 28328.6 |
| gtpase/duf3482 domain-containing protein | LPB072_RS19255 | Not Available | Negative | 4158272 - 4159711 | 52707.2 |
| duf2868 domain-containing protein | LPB072_RS19260 | Not Available | Negative | 4159704 - 4161125 | 50729.0 |
| abc transporter permease | LPB072_RS19265 | Not Available | Negative | 4161191 - 4162801 | 58079.1 |
| abc transporter atp-binding protein | LPB072_RS19270 | Not Available | Positive | 4162878 - 4163951 | 38992.9 |
| hypothetical protein | LPB072_RS19275 | Not Available | Positive | 4164105 - 4166399 | 79745.1 |
| pepsy-associated tm helix domain-containing protein | LPB072_RS19280 | Not Available | Negative | 4166647 - 4168053 | 50049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
