Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2970 domain-containing protein | LPB072_RS19095 | Not Available | Negative | 4125578 - 4125787 | 7746.89 |
| cytochrome c oxidase assembly protein | LPB072_RS19100 | Not Available | Negative | 4125784 - 4126398 | 22331.2 |
| cytochrome oxidase small assembly protein | LPB072_RS23975 | Not Available | Negative | 4126418 - 4126528 | 3968.1 |
| cytochrome c oxidase subunit i | LPB072_RS19105 | Not Available | Negative | 4126533 - 4128158 | 60138.7 |
| cytochrome c oxidase subunit ii | LPB072_RS19110 | Not Available | Negative | 4128199 - 4129362 | 42004.7 |
| duf2244 domain-containing protein | LPB072_RS19115 | Not Available | Negative | 4129501 - 4129983 | 17661.8 |
| biotin synthase | LPB072_RS19120 | Not Available | Negative | 4130155 - 4131063 | 34368.5 |
| comf family protein | LPB072_RS23730 | Not Available | Positive | 4131514 - 4131909 | 14184.1 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | LPB072_RS19130 | Not Available | Positive | 4132034 - 4132507 | 17644.0 |
| hypothetical protein | LPB072_RS19135 | Not Available | Positive | 4132599 - 4132922 | 12207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
