Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(sec) selenium transferase | LPB072_RS18940 | Not Available | Negative | 4091156 - 4092550 | 49596.7 |
| ugsc family (seleno)protein | LPB072_RS24155 | Not Available | Negative | 4092613 - 4093137 | 18557.5 |
| thiol reductase thioredoxin | LPB072_RS18955 | Not Available | Negative | 4093134 - 4094570 | 50284.8 |
| duf3501 family protein | LPB072_RS18960 | Not Available | Negative | 4095052 - 4095654 | 22892.3 |
| (fe-s)-binding protein | LPB072_RS18965 | Not Available | Negative | 4095846 - 4097195 | 49762.1 |
| rubrerythrin family protein | LPB072_RS18970 | Not Available | Negative | 4097371 - 4097793 | 15367.6 |
| smp-30/gluconolactonase/lre family protein | LPB072_RS18975 | Not Available | Negative | 4098023 - 4099150 | 40276.5 |
| valine--trna ligase | LPB072_RS18980 | Not Available | Positive | 4099291 - 4102188 | 107633.0 |
| nad(p)-dependent oxidoreductase | LPB072_RS18985 | Not Available | Negative | 4102207 - 4103235 | 37661.6 |
| sulfurtransferase tusa family protein | LPB072_RS18990 | Not Available | Negative | 4103287 - 4103514 | 8212.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
