Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS18890 | Not Available | Positive | 4082179 - 4082856 | 24063.1 |
| sigma-70 family rna polymerase sigma factor | LPB072_RS18895 | Not Available | Positive | 4082925 - 4083497 | 21546.8 |
| anti-sigma factor domain-containing protein | LPB072_RS18900 | Not Available | Positive | 4083642 - 4084421 | 27582.3 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | LPB072_RS18905 | Not Available | Negative | 4084464 - 4085306 | 31369.3 |
| fkbm family methyltransferase | LPB072_RS18910 | Not Available | Negative | 4085320 - 4086183 | 31269.9 |
| 2og-fe(ii) oxygenase | LPB072_RS18915 | Not Available | Negative | 4086180 - 4087073 | 31990.1 |
| peroxide stress protein yaaa | LPB072_RS18920 | Not Available | Negative | 4087088 - 4087864 | 29343.4 |
| pseudouridine synthase | LPB072_RS18925 | Not Available | Positive | 4088065 - 4088787 | 26867.3 |
| Trna-sec(p) | Not Available | Not Available | Positive | 4089099 - 4089190 | Not Available |
| selenocysteine-specific translation elongation factor | LPB072_RS18935 | Not Available | Negative | 4089261 - 4091159 | 66963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
